# filelist

dirname: /usr/share/javadoc/tomcat/org/apache/catalina/servlets
filetypes: fffffffffff
filenames:
  CGIServlet.CGIEnvironment.html/CGIServlet.CGIRunner.html/CGIServlet.HTTPHeaderInputStream.html/CGIServlet.html/Constants.html/DefaultServlet.Range.html/DefaultServlet.html/WebdavServlet.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/valves
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffd
filenames:
  AbstractAccessLogValve.AccessLogElement.html/AbstractAccessLogValve.ByteSentElement.html/AbstractAccessLogValve.CookieElement.html/AbstractAccessLogValve.DateAndTimeElement.html/AbstractAccessLogValve.DateFormatCache.Cache.html/AbstractAccessLogValve.DateFormatCache.html/AbstractAccessLogValve.ElapsedTimeElement.html/AbstractAccessLogValve.FirstByteTimeElement.html/AbstractAccessLogValve.HeaderElement.html/AbstractAccessLogValve.HostElement.html/AbstractAccessLogValve.HttpStatusCodeElement.html/AbstractAccessLogValve.LocalAddrElement.html/AbstractAccessLogValve.LocalServerNameElement.html/AbstractAccessLogValve.LogicalUserNameElement.html/AbstractAccessLogValve.MethodElement.html/AbstractAccessLogValve.PortElement.html/AbstractAccessLogValve.ProtocolElement.html/AbstractAccessLogValve.QueryElement.html/AbstractAccessLogValve.RemoteAddrElement.html/AbstractAccessLogValve.RequestAttributeElement.html/AbstractAccessLogValve.RequestElement.html/AbstractAccessLogValve.RequestURIElement.html/AbstractAccessLogValve.ResponseHeaderElement.html/AbstractAccessLogValve.SessionAttributeElement.html/AbstractAccessLogValve.SessionIdElement.html/AbstractAccessLogValve.StringElement.html/AbstractAccessLogValve.ThreadNameElement.html/AbstractAccessLogValve.UserElement.html/AbstractAccessLogValve.html/AccessLogValve.html/CometConnectionManagerValve.html/Constants.AccessLog.html/Constants.html/CrawlerSessionManagerValve.html/ErrorReportValve.html/ExtendedAccessLogValve.CookieElement.html/ExtendedAccessLogValve.DateElement.html/ExtendedAccessLogValve.PatternTokenizer.html/ExtendedAccessLogValve.RequestAttributeElement.html/ExtendedAccessLogValve.RequestHeaderElement.html/ExtendedAccessLogValve.RequestParameterElement.html/ExtendedAccessLogValve.ResponseAllHeaderElement.html/ExtendedAccessLogValve.ResponseHeaderElement.html/ExtendedAccessLogValve.ServletContextElement.html/ExtendedAccessLogValve.SessionAttributeElement.html/ExtendedAccessLogValve.TimeElement.html/ExtendedAccessLogValve.html/JDBCAccessLogValve.html/PersistentValve.html/RemoteAddrValve.html/RemoteHostValve.html/RemoteIpValve.html/RequestFilterValve.html/SSLValve.html/SemaphoreValve.html/StuckThreadDetectionValve.html/ValveBase.html/package-frame.html/package-summary.html/package-tree.html/rewrite


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/jni
filetypes: fffffffffffffffffffffffffffffffffffff
filenames:
  Address.html/BIOCallback.html/Buffer.html/Directory.html/Error.html/File.html/FileInfo.html/Global.html/Library.html/LibraryNotFoundError.html/Local.html/Lock.html/Mmap.html/Multicast.html/OS.html/PasswordCallback.html/Poll.html/Pool.html/PoolCallback.html/Proc.html/ProcErrorCallback.html/Procattr.html/Registry.html/SSL.html/SSLContext.html/SSLSocket.html/Shm.html/Sockaddr.html/Socket.html/Status.html/Stdlib.html/Thread.html/Time.html/User.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/mapper
filetypes: ffffffffffffff
filenames:
  Constants.html/Mapper.ContextList.html/Mapper.ContextVersion.html/Mapper.MapElement.html/Mapper.MappedContext.html/Mapper.MappedHost.html/Mapper.MappedWrapper.html/Mapper.html/MapperListener.html/MappingData.html/WrapperMappingInfo.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/scan
filetypes: fffffffffffff
filenames:
  AbstractInputStreamJar.html/Constants.html/Jar.html/JarFactory.html/JarFileUrlJar.html/JarFileUrlNestedJar.html/NonClosingJarInputStream.html/StandardJarScanFilter.html/StandardJarScanner.html/UrlJar.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/codec
filetypes: ffffffdfff
filenames:
  BinaryDecoder.html/BinaryEncoder.html/Decoder.html/DecoderException.html/Encoder.html/EncoderException.html/binary/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/loader
filetypes: ffffffffffff
filenames:
  Constants.html/JdbcLeakPrevention.html/ParallelWebappClassLoader.html/ResourceEntry.html/WebappClassLoader.html/WebappClassLoaderBase.PrivilegedFindResourceByName.html/WebappClassLoaderBase.PrivilegedGetClassLoader.html/WebappClassLoaderBase.html/WebappLoader.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/security
filetypes: fffffffff
filenames:
  Constants.html/DeployXmlPermission.html/SecurityClassLoad.html/SecurityConfig.html/SecurityListener.html/SecurityUtil.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/group/interceptors
filetypes: ffffffffffffffffffffffff
filenames:
  DomainFilterInterceptor.html/FragmentationInterceptor.FragCollection.html/FragmentationInterceptor.FragKey.html/FragmentationInterceptor.html/GzipInterceptor.html/MessageDispatch15Interceptor.html/MessageDispatchInterceptor.html/NonBlockingCoordinator.CoordinationEvent.html/NonBlockingCoordinator.CoordinationMessage.html/NonBlockingCoordinator.html/OrderInterceptor.Counter.html/OrderInterceptor.MessageOrder.html/OrderInterceptor.html/SimpleCoordinator.html/StaticMembershipInterceptor.html/TcpFailureDetector.html/TcpPingInterceptor.PingThread.html/TcpPingInterceptor.html/ThroughputInterceptor.html/TwoPhaseCommitInterceptor.MapEntry.html/TwoPhaseCommitInterceptor.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/http
filetypes: ffffffffffffffdfffd
filenames:
  CookieProcessor.html/CookieProcessorBase.html/CookieSupport.html/FastHttpDateFormat.html/HttpMessages.html/LegacyCookieProcessor.html/MimeHeaders.html/Parameters.FailReason.html/Parameters.html/RequestUtil.html/Rfc6265CookieProcessor.html/ServerCookie.html/ServerCookies.html/SetCookieSupport.html/fileupload/package-frame.html/package-summary.html/package-tree.html/parser


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/bcel/classfile
filetypes: fffffffffffffffffffffff
filenames:
  AnnotationElementValue.html/AnnotationEntry.html/Annotations.html/ArrayElementValue.html/ClassElementValue.html/ClassFormatException.html/ClassParser.html/Constant.html/ConstantClass.html/ConstantDouble.html/ConstantFloat.html/ConstantInteger.html/ConstantLong.html/ConstantPool.html/ConstantUtf8.html/ElementValue.html/ElementValuePair.html/EnumElementValue.html/JavaClass.html/SimpleElementValue.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/storeconfig
filetypes: ffffffffffffffffffffffffffffffffffffffff
filenames:
  CatalinaClusterSF.html/ChannelSF.html/ConnectorSF.html/ConnectorStoreAppender.html/Constants.html/CredentialHandlerSF.html/GlobalNamingResourcesSF.html/IStoreConfig.html/IStoreFactory.html/InstanceListenerSF.html/InterceptorSF.html/JarScannerSF.html/LoaderSF.html/ManagerSF.html/NamingResourcesSF.html/PersistentManagerSF.html/RealmSF.html/SenderSF.html/StandardContextSF.html/StandardEngineSF.html/StandardHostSF.html/StandardServerSF.html/StandardServiceSF.html/StoreAppender.html/StoreConfig.html/StoreConfigLifecycleListener.html/StoreContextAppender.html/StoreDescription.html/StoreFactoryBase.html/StoreFactoryRule.html/StoreFileMover.html/StoreLoader.html/StoreRegistry.html/WatchedResourceSF.html/WebResourceRootSF.html/WrapperLifecycleSF.html/WrapperListenerSF.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/el/util
filetypes: fffffff
filenames:
  ConcurrentCache.html/MessageFactory.html/ReflectionUtil.html/Validation.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/manager/host
filetypes: ffffff
filenames:
  Constants.html/HTMLHostManagerServlet.html/HostManagerServlet.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/ha/deploy
filetypes: ffffffffffff
filenames:
  Constants.html/FarmWarDeployer.html/FileChangeListener.html/FileMessage.html/FileMessageFactory.html/UndeployMessage.html/WarWatcher.WarFilter.html/WarWatcher.WarInfo.html/WarWatcher.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/websocket/server
filetypes: fffffffffffffffff
filenames:
  Constants.html/DefaultServerEndpointConfigurator.html/UpgradeUtil.html/UriTemplate.html/WsContextListener.html/WsFilter.html/WsFrameServer.html/WsHandshakeRequest.html/WsHttpUpgradeHandler.html/WsRemoteEndpointImplServer.html/WsSci.html/WsServerContainer.html/WsSessionListener.html/WsWriteTimeout.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/naming/factory
filetypes: ffffffffffffffffd
filenames:
  BeanFactory.html/Constants.html/DataSourceLinkFactory.DataSourceHandler.html/DataSourceLinkFactory.html/EjbFactory.html/FactoryBase.html/MailSessionFactory.html/OpenEjbFactory.html/ResourceEnvFactory.html/ResourceFactory.html/ResourceLinkFactory.html/SendMailFactory.html/TransactionFactory.html/package-frame.html/package-summary.html/package-tree.html/webservices


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/transport/bio
filetypes: ffffffffd
filenames:
  BioReceiver.html/BioReplicationTask.html/BioSender.html/MultipointBioSender.html/PooledMultiSender.html/package-frame.html/package-summary.html/package-tree.html/util


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/ha/backend
filetypes: fffffffff
filenames:
  CollectedInfo.html/HeartbeatListener.html/MultiCastSender.html/Proxy.html/Sender.html/TcpSender.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/ha/tcp
filetypes: fffffff
filenames:
  Constants.html/ReplicationValve.html/SendMessageData.html/SimpleTcpCluster.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/juli/logging
filetypes: ffffff
filenames:
  Log.html/LogConfigurationException.html/LogFactory.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/coyote/ajp
filetypes: ffffffffffffffffffffff
filenames:
  AbstractAjpProcessor.SocketInputBuffer.html/AbstractAjpProcessor.SocketOutputBuffer.html/AbstractAjpProcessor.html/AbstractAjpProtocol.AbstractAjpConnectionHandler.html/AbstractAjpProtocol.html/AjpAprProcessor.html/AjpAprProtocol.AjpConnectionHandler.html/AjpAprProtocol.html/AjpMessage.html/AjpNio2Processor.html/AjpNio2Protocol.AjpConnectionHandler.html/AjpNio2Protocol.html/AjpNioProcessor.html/AjpNioProtocol.AjpConnectionHandler.html/AjpNioProtocol.html/AjpProcessor.html/AjpProtocol.AjpConnectionHandler.html/AjpProtocol.html/Constants.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/log
filetypes: ffffff
filenames:
  SystemLogHandler.html/UserDataHelper.Mode.html/UserDataHelper.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/net/jsse/openssl
filetypes: ffffff
filenames:
  Authentication.html/Cipher.html/OpenSSLCipherConfigurationParser.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/transport/bio/util
filetypes: ffffff
filenames:
  FastQueue.html/LinkObject.html/SingleRemoveSynchronizedAddLock.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/jdbc/pool/jmx
filetypes: fffff
filenames:
  ConnectionPool.html/ConnectionPoolMBean.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/jasper
filetypes: ffffffddfffdddddd
filenames:
  Constants.html/EmbeddedServletOptions.html/JasperException.html/JspC.html/JspCompilationContext.html/Options.html/compiler/el/package-frame.html/package-summary.html/package-tree.html/runtime/security/servlet/tagplugins/util/xmlparser


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/jdbc/pool
filetypes: ffffffffffffffffffffffffffffffddfff
filenames:
  ClassLoaderUtil.html/ConnectionPool.ConnectionFuture.html/ConnectionPool.PoolCleaner.html/ConnectionPool.html/DataSource.html/DataSourceFactory.html/DataSourceProxy.html/DisposableConnectionFacade.html/FairBlockingQueue.ExchangeCountDownLatch.html/FairBlockingQueue.FairIterator.html/FairBlockingQueue.ItemFuture.html/FairBlockingQueue.html/JdbcInterceptor.html/MultiLockFairBlockingQueue.ExchangeCountDownLatch.html/MultiLockFairBlockingQueue.FairIterator.html/MultiLockFairBlockingQueue.ItemFuture.html/MultiLockFairBlockingQueue.html/PoolConfiguration.html/PoolExhaustedException.html/PoolProperties.InterceptorDefinition.html/PoolProperties.InterceptorProperty.html/PoolProperties.html/PoolUtilities.html/PooledConnection.html/ProxyConnection.html/StatementFacade.StatementProxy.html/StatementFacade.html/TrapException.html/Validator.html/XADataSource.html/interceptor/jmx/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/naming
filetypes: fffffffffffffffffddfff
filenames:
  Constants.html/ContextAccessController.html/ContextBindings.html/EjbRef.html/HandlerRef.html/NameParserImpl.html/NamingContext.html/NamingContextBindingsEnumeration.html/NamingContextEnumeration.html/NamingEntry.html/ResourceEnvRef.html/ResourceLinkRef.html/ResourceRef.html/SelectorContext.html/ServiceRef.html/StringManager.html/TransactionRef.html/factory/java/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/jasper/xmlparser
filetypes: ffffffffffff
filenames:
  ASCIIReader.html/EncodingMap.html/SymbolTable.html/UCSReader.html/UTF8Reader.html/XMLChar.html/XMLEncodingDetector.html/XMLString.html/XMLStringBuffer.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/valves/rewrite
filetypes: fffffffffffffffffffffff
filenames:
  Resolver.html/ResolverImpl.html/RewriteCond.Condition.html/RewriteCond.LexicalCondition.html/RewriteCond.PatternCondition.html/RewriteCond.ResourceCondition.html/RewriteCond.html/RewriteMap.html/RewriteRule.html/RewriteValve.html/Substitution.MapElement.html/Substitution.RewriteCondBackReferenceElement.html/Substitution.RewriteRuleBackReferenceElement.html/Substitution.ServerVariableElement.html/Substitution.ServerVariableEnvElement.html/Substitution.ServerVariableHttpElement.html/Substitution.ServerVariableSslElement.html/Substitution.StaticElement.html/Substitution.SubstitutionElement.html/Substitution.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/util
filetypes: ffffffffff
filenames:
  Arrays.html/ExceptionUtils.html/ExecutorFactory.html/Logs.html/StringManager.html/TcclThreadFactory.html/UUIDGenerator.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/startup
filetypes: ffffffffffffffffffffffffffffffffffffffffff
filenames:
  Bootstrap.html/Catalina.CatalinaShutdownHook.html/Catalina.html/CatalinaProperties.html/ClassLoaderFactory.Repository.html/ClassLoaderFactory.RepositoryType.html/ClassLoaderFactory.html/ConnectorCreateRule.html/Constants.html/ContextConfig.html/ContextRuleSet.html/CopyParentClassLoaderRule.html/CredentialHandlerRuleSet.html/EngineConfig.html/EngineRuleSet.html/ExpandWar.html/FailedContext.html/HomesUserDatabase.html/HostConfig.DeployedApplication.html/HostConfig.html/HostRuleSet.html/LifecycleListenerRule.html/NamingRuleSet.html/PasswdUserDatabase.html/RealmRuleSet.html/SafeForkJoinWorkerThreadFactory.html/SetAllPropertiesRule.html/SetContextPropertiesRule.html/SetNextNamingRule.html/Tomcat.DefaultWebXmlListener.html/Tomcat.ExistingStandardWrapper.html/Tomcat.FixContextListener.html/Tomcat.html/Tool.html/UserConfig.html/UserDatabase.html/VersionLoggerListener.html/WebAnnotationSet.html/WebappServiceLoader.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/ant
filetypes: fffffffffffffffffffffdfff
filenames:
  AbstractCatalinaCommandTask.html/AbstractCatalinaTask.html/BaseRedirectorHelperTask.html/DeployTask.html/FindLeaksTask.html/JKStatusUpdateTask.html/JMXGetTask.html/JMXQueryTask.html/JMXSetTask.html/ListTask.html/ReloadTask.html/ResourcesTask.html/ServerinfoTask.html/SessionsTask.html/SslConnectorCiphersTask.html/StartTask.html/StopTask.html/ThreaddumpTask.html/UndeployTask.html/ValidatorTask.html/VminfoTask.html/jmx/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/jasper/util
filetypes: ffffff
filenames:
  FastRemovalDequeue.Entry.html/FastRemovalDequeue.html/UniqueAttributesImpl.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/transport/nio
filetypes: ffffffff
filenames:
  NioReceiver.html/NioReplicationTask.html/NioSender.html/ParallelNioSender.html/PooledParallelSender.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/dbcp/pool2/impl
filetypes: ffffffffffffffffffff
filenames:
  AbandonedConfig.html/BaseGenericObjectPool.html/BaseObjectPoolConfig.html/DefaultEvictionPolicy.html/DefaultPooledObject.html/DefaultPooledObjectInfo.html/DefaultPooledObjectInfoMBean.html/EvictionConfig.html/EvictionPolicy.html/GenericKeyedObjectPool.html/GenericKeyedObjectPoolConfig.html/GenericKeyedObjectPoolMXBean.html/GenericObjectPool.html/GenericObjectPoolConfig.html/GenericObjectPoolMXBean.html/PooledSoftReference.html/SoftReferenceObjectPool.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/coyote/http11/upgrade
filetypes: fffffffffffffffffff
filenames:
  AbstractProcessor.html/AbstractServletInputStream.html/AbstractServletOutputStream.html/AprProcessor.html/AprServletInputStream.html/AprServletOutputStream.html/BioProcessor.html/BioServletInputStream.html/BioServletOutputStream.html/Constants.html/Nio2Processor.html/Nio2ServletInputStream.html/Nio2ServletOutputStream.html/NioProcessor.html/NioServletInputStream.html/NioServletOutputStream.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/manager
filetypes: ffffffffdfffd
filenames:
  Constants.html/DummyProxySession.html/HTMLManagerServlet.html/JMXProxyServlet.html/JspHelper.html/ManagerServlet.html/StatusManagerServlet.html/StatusTransformer.html/host/package-frame.html/package-summary.html/package-tree.html/util


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/group
filetypes: ffffffffffffffffdfff
filenames:
  AbsoluteOrder.AbsoluteComparator.html/AbsoluteOrder.html/ChannelCoordinator.html/ChannelInterceptorBase.html/ExtendedRpcCallback.html/GroupChannel.HeartbeatThread.html/GroupChannel.InterceptorIterator.html/GroupChannel.html/InterceptorPayload.html/Response.html/RpcCallback.html/RpcChannel.RpcCollector.html/RpcChannel.RpcCollectorKey.html/RpcChannel.html/RpcMessage.NoRpcChannelReply.html/RpcMessage.html/interceptors/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/dbcp/dbcp2/datasources
filetypes: ffffffff
filenames:
  InstanceKeyDataSource.html/PerUserPoolDataSource.html/PerUserPoolDataSourceFactory.html/SharedPoolDataSource.html/SharedPoolDataSourceFactory.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/tribes/membership
filetypes: fffffffffffff
filenames:
  Constants.html/McastService.html/McastServiceImpl.ReceiverThread.html/McastServiceImpl.RecoveryThread.html/McastServiceImpl.SenderThread.html/McastServiceImpl.html/MemberImpl.html/Membership.MbrEntry.html/Membership.html/StaticMember.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/session
filetypes: fffffffffffffff
filenames:
  Constants.html/FileStore.html/JDBCStore.html/ManagerBase.SessionTiming.html/ManagerBase.html/PersistentManager.html/PersistentManagerBase.html/StandardManager.html/StandardSession.html/StandardSessionFacade.html/StoreBase.html/TooManyActiveSessionsException.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/ha/authenticator
filetypes: fffff
filenames:
  ClusterSingleSignOn.html/ClusterSingleSignOnListener.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/comet
filetypes: fffffffff
filenames:
  CometEvent.EventSubType.html/CometEvent.EventType.html/CometEvent.html/CometFilter.html/CometFilterChain.html/CometProcessor.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/realm
filetypes: fffffffffffffffffffffffffff
filenames:
  CombinedRealm.html/Constants.html/DataSourceRealm.html/DigestCredentialHandlerBase.html/GenericPrincipal.html/JAASCallbackHandler.html/JAASMemoryLoginModule.html/JAASRealm.html/JDBCRealm.html/JNDIRealm.User.html/JNDIRealm.html/LockOutRealm.LockRecord.html/LockOutRealm.html/MemoryRealm.html/MemoryRuleSet.html/MessageDigestCredentialHandler.html/NestedCredentialHandler.html/NullRealm.html/RealmBase.AllRolesMode.html/RealmBase.html/SecretKeyCredentialHandler.html/UserDatabaseRealm.html/X509SubjectDnRetriever.html/X509UsernameRetriever.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/webresources
filetypes: ffffffffffffffffffffffffffffffffd
filenames:
  AbstractArchiveResource.JarInputStreamWrapper.html/AbstractArchiveResource.html/AbstractArchiveResourceSet.html/AbstractFileResourceSet.html/AbstractResource.html/AbstractResourceSet.html/AbstractSingleArchiveResource.html/AbstractSingleArchiveResourceSet.html/Cache.html/CachedResource.html/ClasspathURLStreamHandler.html/Constants.html/DirResourceSet.html/EmptyResource.html/EmptyResourceSet.html/ExtractingRoot.html/FileResource.html/FileResourceSet.html/JarResource.html/JarResourceRoot.html/JarResourceSet.html/JarWarResource.html/JarWarResourceSet.html/StandardRoot.html/TomcatJarInputStream.html/TomcatURLStreamHandlerFactory.html/VirtualResource.html/WarResource.html/WarResourceSet.html/package-frame.html/package-summary.html/package-tree.html/war


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/http/parser
filetypes: fffffffff
filenames:
  AcceptLanguage.html/Authorization.html/Cookie.html/HttpParser.html/MediaType.html/MediaTypeCache.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/threads
filetypes: fffffffffff
filenames:
  Constants.html/LimitLatch.html/ResizableExecutor.html/StopPooledThreadException.html/TaskQueue.html/TaskThread.html/TaskThreadFactory.html/ThreadPoolExecutor.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/juli
filetypes: fffffffffffffdfff
filenames:
  AsyncFileHandler.LogEntry.html/AsyncFileHandler.LoggerThread.html/AsyncFileHandler.html/ClassLoaderLogManager.ClassLoaderLogInfo.html/ClassLoaderLogManager.LogNode.html/ClassLoaderLogManager.RootLogger.html/ClassLoaderLogManager.html/DateFormatCache.html/FileHandler.html/JdkLoggerFormatter.html/OneLineFormatter.html/VerbatimFormatter.html/WebappProperties.html/logging/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/buf
filetypes: ffffffffffffffffffffff
filenames:
  Ascii.html/B2CConverter.html/ByteChunk.ByteInputChannel.html/ByteChunk.ByteOutputChannel.html/ByteChunk.html/C2BConverter.html/CharChunk.CharInputChannel.html/CharChunk.CharOutputChannel.html/CharChunk.html/Constants.html/HexUtils.html/MessageBytes.html/StringCache.html/UDecoder.html/UEncoder.SafeCharsSet.html/UEncoder.html/UriUtil.html/Utf8Decoder.html/Utf8Encoder.html/package-frame.html/package-summary.html/package-tree.html


dirname: /usr/share/javadoc/tomcat/org/apache/tomcat/util/http/fileupload
filetypes: fffffffffffffffffffffffffffffffdfffdd
filenames:
  ByteArrayOutputStream.html/DeferredFileOutputStream.html/FileItem.html/FileItemFactory.html/FileItemHeaders.html/FileItemHeadersSupport.html/FileItemIterator.html/FileItemStream.ItemSkippedException.html/FileItemStream.html/FileUpload.html/FileUploadBase.FileSizeLimitExceededException.html/FileUploadBase.FileUploadIOException.html/FileUploadBase.IOFileUploadException.html/FileUploadBase.InvalidContentTypeException.html/FileUploadBase.SizeException.html/FileUploadBase.SizeLimitExceededException.html/FileUploadBase.html/FileUploadException.html/FileUtils.html/IOUtils.html/InvalidFileNameException.html/MultipartStream.IllegalBoundaryException.html/MultipartStream.ItemInputStream.html/MultipartStream.MalformedStreamException.html/MultipartStream.ProgressNotifier.html/MultipartStream.html/ParameterParser.html/ProgressListener.html/RequestContext.html/ThresholdingOutputStream.html/UploadContext.html/disk/package-frame.html/package-summary.html/package-tree.html/servlet/util


dirname: /usr/share/javadoc/tomcat/org/apache/catalina/util
filetypes: ffffffffffffffffffffffffffffffff
filenames:
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dirname: /usr/share/ugene/data/position_weight_matrix/UniPROBE/Cell08
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filetypes:
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dirname: /usr/share/ugene/data/workflow_samples/users
filetypes: fffffffff
filenames:
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dirname: /usr/share/ugene/data/position_weight_matrix/JASPAR/fungi
filenames:
  MA0265.1.pfm/MA0266.1.pfm/MA0267.1.pfm/MA0268.1.pfm/MA0269.1.pfm/MA0270.1.pfm/MA0271.1.pfm/MA0272.1.pfm/MA0273.1.pfm/MA0274.1.pfm/MA0275.1.pfm/MA0276.1.pfm/MA0277.1.pfm/MA0278.1.pfm/MA0279.1.pfm/MA0280.1.pfm/MA0281.1.pfm/MA0282.1.pfm/MA0283.1.pfm/MA0284.1.pfm/MA0285.1.pfm/MA0286.1.pfm/MA0287.1.pfm/MA0288.1.pfm/MA0289.1.pfm/MA0290.1.pfm/MA0291.1.pfm/MA0292.1.pfm/MA0293.1.pfm/MA0294.1.pfm/MA0295.1.pfm/MA0296.1.pfm/MA0297.1.pfm/MA0298.1.pfm/MA0299.1.pfm/MA0300.1.pfm/MA0301.1.pfm/MA0302.1.pfm/MA0303.1.pfm/MA0304.1.pfm/MA0305.1.pfm/MA0306.1.pfm/MA0307.1.pfm/MA0308.1.pfm/MA0309.1.pfm/MA0310.1.pfm/MA0311.1.pfm/MA0312.1.pfm/MA0313.1.pfm/MA0314.1.pfm/MA0315.1.pfm/MA0316.1.pfm/MA0317.1.pfm/MA0318.1.pfm/MA0319.1.pfm/MA0320.1.pfm/MA0321.1.pfm/MA0322.1.pfm/MA0323.1.pfm/MA0324.1.pfm/MA0325.1.pfm/MA0326.1.pfm/MA0327.1.pfm/MA0328.1.pfm/MA0329.1.pfm/MA0330.1.pfm/MA0331.1.pfm/MA0332.1.pfm/MA0333.1.pfm/MA0334.1.pfm/MA0335.1.pfm/MA0336.1.pfm/MA0337.1.pfm/MA0338.1.pfm/MA0339.1.pfm/MA0340.1.pfm/MA0341.1.pfm/MA0342.1.pfm/MA0343.1.pfm/MA0344.1.pfm/MA0345.1.pfm/MA0346.1.pfm/MA0347.1.pfm/MA0348.1.pfm/MA0349.1.pfm/MA0350.1.pfm/MA0351.1.pfm/MA0352.1.pfm/MA0353.1.pfm/MA0354.1.pfm/MA0355.1.pfm/MA0356.1.pfm/MA0357.1.pfm/MA0358.1.pfm/MA0359.1.pfm/MA0360.1.pfm/MA0361.1.pfm/MA0362.1.pfm/MA0363.1.pfm/MA0364.1.pfm/MA0365.1.pfm/MA0366.1.pfm/MA0367.1.pfm/MA0368.1.pfm/MA0369.1.pfm/MA0370.1.pfm/MA0371.1.pfm/MA0372.1.pfm/MA0373.1.pfm/MA0374.1.pfm/MA0375.1.pfm/MA0376.1.pfm/MA0377.1.pfm/MA0378.1.pfm/MA0379.1.pfm/MA0380.1.pfm/MA0381.1.pfm/MA0382.1.pfm/MA0383.1.pfm/MA0384.1.pfm/MA0385.1.pfm/MA0386.1.pfm/MA0387.1.pfm/MA0388.1.pfm/MA0389.1.pfm/MA0390.1.pfm/MA0391.1.pfm/MA0392.1.pfm/MA0393.1.pfm/MA0394.1.pfm/MA0395.1.pfm/MA0396.1.pfm/MA0397.1.pfm/MA0398.1.pfm/MA0399.1.pfm/MA0400.1.pfm/MA0401.1.pfm/MA0402.1.pfm/MA0403.1.pfm/MA0404.1.pfm/MA0405.1.pfm/MA0406.1.pfm/MA0407.1.pfm/MA0408.1.pfm/MA0409.1.pfm/MA0410.1.pfm/MA0411.1.pfm/MA0412.1.pfm/MA0413.1.pfm/MA0414.1.pfm/MA0415.1.pfm/MA0416.1.pfm/MA0417.1.pfm/MA0418.1.pfm/MA0419.1.pfm/MA0420.1.pfm/MA0421.1.pfm/MA0422.1.pfm/MA0423.1.pfm/MA0424.1.pfm/MA0425.1.pfm/MA0426.1.pfm/MA0427.1.pfm/MA0428.1.pfm/MA0429.1.pfm/MA0430.1.pfm/MA0431.1.pfm/MA0432.1.pfm/MA0433.1.pfm/MA0434.1.pfm/MA0435.1.pfm/MA0436.1.pfm/MA0437.1.pfm/MA0438.1.pfm/MA0439.1.pfm/MA0440.1.pfm/MA0441.1.pfm/matrix_list.txt

filetypes:
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dirname: /usr/share/ugene/data/position_weight_matrix/UniPROBE/GR09
filetypes: fffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffffff
filenames:
  Aft1.pwm/Aro80.pwm/Asg1.pwm/Bas1.pwm/Cbf1.pwm/Cep3.pwm/Cha4.pwm/Cup9.pwm/Ecm22.pwm/Fhl1.pwm/Fkh1.pwm/Fkh2.pwm/Gal4.pwm/Gat1.pwm/Gat3.pwm/Gat4.pwm/Gcn4.pwm/Gln3.pwm/Gsm1.pwm/Gzf3.pwm/Hal9.pwm/Leu3.pwm/Lys14.pwm/Matalpha2.pwm/Mbp1.pwm/Mcm1.pwm/Met32.pwm/Mga1.pwm/Mig1.pwm/Mig2.pwm/Mig3.pwm/Ndt80.pwm/Nhp6a.pwm/Nhp6b.pwm/Nrg1.pwm/Oaf1.pwm/Pbf1.pwm/Pbf2.pwm/Pdr1.pwm/Phd1.pwm/Pho2.pwm/Pho4.pwm/Put3.pwm/Rap1.pwm/Rdr1.pwm/Rds1.pwm/Rds2.pwm/Rgt1.pwm/Rph1.pwm/Rpn4.pwm/Rsc3.pwm/Rsc30.pwm/Rtg3.pwm/Sfl1.pwm/Sfp1.pwm/Sip4.pwm/Skn7.pwm/Smp1.pwm/Spt15.pwm/Srd1.pwm/Stb3.pwm/Stp2.pwm/Stp4.pwm/Sum1.pwm/Sut2.pwm/Tbf1.pwm/Tbs1.pwm/Tea1.pwm/Tec1.pwm/Tye7.pwm/Ume6.pwm/Usv1.pwm/Xbp1.pwm/Yap1.pwm/Yap6.pwm/Ybr239c.pwm/Ydr520c.pwm/Yer130c.pwm/Ygr067c.pwm/Ykl222c.pwm/Yll054c.pwm/Yml081w.pwm/Ynr063w.pwm/Yox1.pwm/Ypr013c.pwm/Ypr015c.pwm/Ypr196w.pwm/Yrm1.pwm/Yrr1.pwm


dirname: /usr/share/ugene/data/position_weight_matrix/JASPAR/insects
filenames:
  MA0010.1.pfm/MA0011.1.pfm/MA0012.1.pfm/MA0013.1.pfm/MA0015.1.pfm/MA0016.1.pfm/MA0022.1.pfm/MA0023.1.pfm/MA0026.1.pfm/MA00445.1.pfm/MA0049.1.pfm/MA0085.1.pfm/MA0086.1.pfm/MA0094.2.pfm/MA0126.1.pfm/MA0165.1.pfm/MA0166.1.pfm/MA0167.1.pfm/MA0168.1.pfm/MA0169.1.pfm/MA0170.1.pfm/MA0171.1.pfm/MA0172.1.pfm/MA0173.1.pfm/MA0174.1.pfm/MA0175.1.pfm/MA0176.1.pfm/MA0177.1.pfm/MA0178.1.pfm/MA0179.1.pfm/MA0180.1.pfm/MA0181.1.pfm/MA0182.1.pfm/MA0183.1.pfm/MA0184.1.pfm/MA0185.1.pfm/MA0186.1.pfm/MA0187.1.pfm/MA0188.1.pfm/MA0189.1.pfm/MA0190.1.pfm/MA0191.1.pfm/MA0192.1.pfm/MA0193.1.pfm/MA0194.1.pfm/MA0195.1.pfm/MA0196.1.pfm/MA0197.1.pfm/MA0198.1.pfm/MA0199.1.pfm/MA0200.1.pfm/MA0201.1.pfm/MA0202.1.pfm/MA0203.1.pfm/MA0204.1.pfm/MA0205.1.pfm/MA0206.1.pfm/MA0207.1.pfm/MA0208.1.pfm/MA0209.1.pfm/MA0210.1.pfm/MA0211.1.pfm/MA0212.1.pfm/MA0213.1.pfm/MA0214.1.pfm/MA0215.1.pfm/MA0216.1.pfm/MA0217.1.pfm/MA0218.1.pfm/MA0219.1.pfm/MA0220.1.pfm/MA0221.1.pfm/MA0222.1.pfm/MA0223.1.pfm/MA0224.1.pfm/MA0225.1.pfm/MA0226.1.pfm/MA0227.1.pfm/MA0228.1.pfm/MA0229.1.pfm/MA0230.1.pfm/MA0231.1.pfm/MA0232.1.pfm/MA0233.1.pfm/MA0234.1.pfm/MA0235.1.pfm/MA0236.1.pfm/MA0237.1.pfm/MA0238.1.pfm/MA0239.1.pfm/MA0240.1.pfm/MA0241.1.pfm/MA0242.1.pfm/MA0243.1.pfm/MA0244.1.pfm/MA0245.1.pfm/MA0246.1.pfm/MA0247.1.pfm/MA0248.1.pfm/MA0249.1.pfm/MA0250.1.pfm/MA0251.1.pfm/MA0252.1.pfm/MA0253.1.pfm/MA0254.1.pfm/MA0255.1.pfm/MA0256.1.pfm/MA0257.1.pfm/MA0443.1.pfm/MA0444.1.pfm/MA0446.1.pfm/MA0447.1.pfm/MA0448.1.pfm/MA0449.1.pfm/MA0450.1.pfm/MA0451.1.pfm/MA0452.1.pfm/MA0453.1.pfm/MA0454.1.pfm/MA0455.1.pfm/MA0456.1.pfm/MA0457.1.pfm/MA0458.1.pfm/MA0459.1.pfm/MA0460.1.pfm/matrix_list.txt

filetypes:
[cell repeats an earlier one in this file: 126 characters]


dirname: /usr/share/ugene/data/back_translation/Mammalia
filetypes: fffff
filenames:
  Bos_taurus_(cow).cut/Canis_familiaris_(dog).cut/Sus_scrofa_(pig).cut/mitochondrion_Bos_taurus_(cow).cut/mitochondrion_Sus_scrofa_(pig).cut


dirname: /usr/share/ugene/data/back_translation/Primates
filetypes: ffff
filenames:
  Homo_sapiens_(human).cut/Pan_troglodytes_(chimpanzee).cut/mitochondrion_Homo_sapiens_(human).cut/mitochondrion_Pan_troglodytes_(chimpanzee).cut


dirname: /usr/share/ugene/data/sitecon_models/prokaryotic
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filenames:
  AgaR.sitecon.gz/AraC.sitecon.gz/ArcA.sitecon.gz/ArgR.sitecon.gz/CpxR.sitecon.gz/Crp.sitecon.gz/CysB.sitecon.gz/CytR.sitecon.gz/DeoR.sitecon.gz/DnaA.sitecon.gz/FUR.sitecon.gz/FadR.sitecon.gz/FlhDC.sitecon.gz/Fnr.sitecon.gz/Frur.sitecon.gz/GALR.sitecon.gz/GALS.sitecon.gz/GLPR.sitecon.gz/GNTR.sitecon.gz/HNS.sitecon.gz/ICLR.sitecon.gz/IHF.sitecon.gz/ISCR1.sitecon.gz/ISCR3.sitecon.gz/LEXA.sitecon.gz/Lrp.sitecon.gz/MALT.sitecon.gz/MARA.sitecon.gz/MELR.sitecon.gz/MLC.sitecon.gz/MODE.sitecon.gz/MetJ.sitecon.gz/MetR1.sitecon.gz/NAC.sitecon.gz/NAGC_new2.sitecon.gz/NANR.sitecon.gz/NARL2.sitecon.gz/NARP.sitecon.gz/NTRC.sitecon.gz/NarL.sitecon.gz/OmpR.sitecon.gz/OxyR.sitecon.gz/PHOB.sitecon.gz/PHOP.sitecon.gz/PurR.sitecon.gz/ROB.sitecon.gz/RcsB_1core.sitecon.gz/RcsB_2core.sitecon.gz/Rob2.sitecon.gz/TORR.sitecon.gz/TRPR.sitecon.gz/TyrR.sitecon.gz/fis_new1.sitecon.gz/soxS.sitecon.gz


dirname: /usr/share/ugene/data/workflow_samples/Custom elements
filetypes: fffff
filenames:
  casava-fastq-filter.uwl/fastq-trimmer.uwl/script-dump-sequence-info.uwl/script-linkdata-fetch-seq.uwl/script-quality-filter.uwl


dirname: /usr/share/ugene/data/back_translation/Vertebrates
filetypes: fffff
filenames:
  Gallus_gallus_(chicken).cut/Takifugu_rubripes_(Fugu_rubripes).cut/Xenopus_laevis_(African_clawed_frog).cut/mitochondrion_Gallus_gallus_(chicken).cut/mitochondrion_Takifugu_rubripes_(Fugu_rubripes).cut


dirname: /usr/share/ugene/data/sitecon_models/eukaryotic
filetypes: ffffffffffffffffffffffffffffffffffffffffffff
filenames:
  CEBP_a.sitecon.gz/CEBPall.sitecon.gz/CLOCK.sitecon.gz/CRE.sitecon.gz/E2F1.sitecon.gz/E2F1DP1sel1.sitecon.gz/EGR1.sitecon.gz/Eklf.sitecon.gz/GATA1.sitecon.gz/GATA_ALL.sitecon.gz/Gata2.sitecon.gz/Gata3.sitecon.gz/HMG1.sitecon.gz/HNF1.sitecon.gz/HNF3_4.sitecon.gz/HNF4.sitecon.gz/MYOGsel3.sitecon.gz/MyoD.sitecon.gz/NF1.sitecon.gz/NFATp.sitecon.gz/NFkB_all.sitecon.gz/NFkB_hetero.sitecon.gz/NFkB_homo.sitecon.gz/Nf_e2.sitecon.gz/Nrf2.sitecon.gz/Oct1.sitecon.gz/Oct_all.sitecon.gz/PPRE.sitecon.gz/Pu1.sitecon.gz/SRE_can.sitecon.gz/STAT.sitecon.gz/STAT1.sitecon.gz/TTF1.sitecon.gz/USF.sitecon.gz/cMyc_can.sitecon.gz/er2.sitecon.gz/irf.sitecon.gz/isre.sitecon.gz/nfy.sitecon.gz/p53.sitecon.gz/setCREB.sitecon.gz/setCREBzag.sitecon.gz/srf_all.sitecon.gz/yy1.sitecon.gz


dirname: /usr/share/ugene/data/back_translation/Invertebrates
filetypes: ffffff
filenames:
  Apis_mellifera_(honey_bee).cut/Caenorhabditis_elegans.cut/Drosophila_melanogaster_(fruit_fly).cut/Plasmodium_falciparum_(malaria_parasite_P._falciparum).cut/mitochondrion_Caenorhabditis_elegans.cut/mitochondrion_Drosophila_melanogaster_(fruit_fly).cut


dirname: /usr/lib/ugene
filetypes: ffffffffffffffffffffffffffffffffffffffffffffffffdfffffff
filenames:
  libU2Algorithm.so/libU2Algorithm.so.1/libU2Algorithm.so.1.0/libU2Algorithm.so.1.0.0/libU2Core.so/libU2Core.so.1/libU2Core.so.1.0/libU2Core.so.1.0.0/libU2Designer.so/libU2Designer.so.1/libU2Designer.so.1.0/libU2Designer.so.1.0.0/libU2Formats.so/libU2Formats.so.1/libU2Formats.so.1.0/libU2Formats.so.1.0.0/libU2Gui.so/libU2Gui.so.1/libU2Gui.so.1.0/libU2Gui.so.1.0.0/libU2Lang.so/libU2Lang.so.1/libU2Lang.so.1.0/libU2Lang.so.1.0.0/libU2Private.so/libU2Private.so.1/libU2Private.so.1.0/libU2Private.so.1.0.0/libU2Script.so/libU2Script.so.1/libU2Script.so.1.0/libU2Script.so.1.0.0/libU2Test.so/libU2Test.so.1/libU2Test.so.1.0/libU2Test.so.1.0.0/libU2View.so/libU2View.so.1/libU2View.so.1.0/libU2View.so.1.0.0/libbreakpad.so/libbreakpad.so.1/libbreakpad.so.1.0/libbreakpad.so.1.0.0/libugenedb.so/libugenedb.so.1/libugenedb.so.1.0/libugenedb.so.1.0.0/plugins/plugins_checker/transl_en.qm/transl_ru.qm/ugene/ugenecl/ugenem/ugeneui


dirname: /usr/share/ugene/data/workflow_samples/NGS/tuxedo
filetypes: ffffff
filenames:
  tuxedo_main.uwl/tuxedo_main_paired.uwl/tuxedo_no_novel_transcr.uwl/tuxedo_no_novel_transcr_paired.uwl/tuxedo_single_dataset.uwl/tuxedo_single_dataset_paired.uwl


dirname: /usr/share/ugene/data/back_translation/Bacteria
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dirname: /usr/share/devhelp/books/vala-0.34
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filetypes:
[cell repeats an earlier one in this file: 120 characters]


dirname: /usr/share/doc/valgrind/html
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