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ROOT
6.06/08
Reference Guide
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Definition at line 57 of file MethodRuleFit.h.
Public Member Functions | |
| MethodRuleFit (const TString &jobName, const TString &methodTitle, DataSetInfo &theData, const TString &theOption="", TDirectory *theTargetDir=0) | |
| standard constructor More... | |
| MethodRuleFit (DataSetInfo &theData, const TString &theWeightFile, TDirectory *theTargetDir=NULL) | |
| constructor from weight file More... | |
| virtual | ~MethodRuleFit (void) |
| destructor More... | |
| virtual Bool_t | HasAnalysisType (Types::EAnalysisType type, UInt_t numberClasses, UInt_t) |
| RuleFit can handle classification with 2 classes. More... | |
| void | Train (void) |
| void | AddWeightsXMLTo (void *parent) const |
| add the rules to XML node More... | |
| void | ReadWeightsFromStream (std::istream &istr) |
| read rules from an std::istream More... | |
| void | ReadWeightsFromXML (void *wghtnode) |
| read rules from XML node More... | |
| Double_t | GetMvaValue (Double_t *err=0, Double_t *errUpper=0) |
| returns MVA value for given event More... | |
| void | WriteMonitoringHistosToFile (void) const |
| write special monitoring histograms to file (here ntuple) More... | |
| const Ranking * | CreateRanking () |
| computes ranking of input variables More... | |
| Bool_t | UseBoost () const |
| RuleFit * | GetRuleFitPtr () |
| const RuleFit * | GetRuleFitConstPtr () const |
| TDirectory * | GetMethodBaseDir () const |
| const std::vector< TMVA::Event * > & | GetTrainingEvents () const |
| const std::vector< TMVA::DecisionTree * > & | GetForest () const |
| Int_t | GetNTrees () const |
| Double_t | GetTreeEveFrac () const |
| const SeparationBase * | GetSeparationBaseConst () const |
| SeparationBase * | GetSeparationBase () const |
| TMVA::DecisionTree::EPruneMethod | GetPruneMethod () const |
| Double_t | GetPruneStrength () const |
| Double_t | GetMinFracNEve () const |
| Double_t | GetMaxFracNEve () const |
| Int_t | GetNCuts () const |
| Int_t | GetGDNPathSteps () const |
| Double_t | GetGDPathStep () const |
| Double_t | GetGDErrScale () const |
| Double_t | GetGDPathEveFrac () const |
| Double_t | GetGDValidEveFrac () const |
| Double_t | GetLinQuantile () const |
| const TString | GetRFWorkDir () const |
| Int_t | GetRFNrules () const |
| Int_t | GetRFNendnodes () const |
Public Member Functions inherited from TMVA::MethodBase | |
| MethodBase (const TString &jobName, Types::EMVA methodType, const TString &methodTitle, DataSetInfo &dsi, const TString &theOption="", TDirectory *theBaseDir=0) | |
| standard constructur More... | |
| MethodBase (Types::EMVA methodType, DataSetInfo &dsi, const TString &weightFile, TDirectory *theBaseDir=0) | |
| constructor used for Testing + Application of the MVA, only (no training), using given WeightFiles More... | |
| virtual | ~MethodBase () |
| destructor More... | |
| void | SetupMethod () |
| setup of methods More... | |
| void | ProcessSetup () |
| process all options the "CheckForUnusedOptions" is done in an independent call, since it may be overridden by derived class (sometimes, eg, fitters are used which can only be implemented during training phase) More... | |
| virtual void | CheckSetup () |
| check may be overridden by derived class (sometimes, eg, fitters are used which can only be implemented during training phase) More... | |
| void | AddOutput (Types::ETreeType type, Types::EAnalysisType analysisType) |
| void | TrainMethod () |
| virtual std::map< TString, Double_t > | OptimizeTuningParameters (TString fomType="ROCIntegral", TString fitType="FitGA") |
| call the Optimzier with the set of paremeters and ranges that are meant to be tuned. More... | |
| virtual void | SetTuneParameters (std::map< TString, Double_t > tuneParameters) |
| set the tuning parameters accoding to the argument This is just a dummy . More... | |
| void | SetTrainTime (Double_t trainTime) |
| Double_t | GetTrainTime () const |
| void | SetTestTime (Double_t testTime) |
| Double_t | GetTestTime () const |
| virtual void | TestClassification () |
| initialization More... | |
| virtual Double_t | GetKSTrainingVsTest (Char_t SorB, TString opt="X") |
| virtual void | TestMulticlass () |
| test multiclass classification More... | |
| virtual void | TestRegression (Double_t &bias, Double_t &biasT, Double_t &dev, Double_t &devT, Double_t &rms, Double_t &rmsT, Double_t &mInf, Double_t &mInfT, Double_t &corr, Types::ETreeType type) |
| calculate <sum-of-deviation-squared> of regression output versus "true" value from test sample More... | |
| virtual void | DeclareCompatibilityOptions () |
| options that are used ONLY for the READER to ensure backward compatibility they are hence without any effect (the reader is only reading the training options that HAD been used at the training of the .xml weightfile at hand More... | |
| virtual void | Reset () |
| Double_t | GetMvaValue (const TMVA::Event *const ev, Double_t *err=0, Double_t *errUpper=0) |
| const std::vector< Float_t > & | GetRegressionValues (const TMVA::Event *const ev) |
| virtual const std::vector< Float_t > & | GetRegressionValues () |
| virtual const std::vector< Float_t > & | GetMulticlassValues () |
| virtual Double_t | GetProba (const Event *ev) |
| virtual Double_t | GetProba (Double_t mvaVal, Double_t ap_sig) |
| compute likelihood ratio More... | |
| virtual Double_t | GetRarity (Double_t mvaVal, Types::ESBType reftype=Types::kBackground) const |
| compute rarity: R(x) = Integrate_[-oo..x] { PDF(x') dx' } where PDF(x) is the PDF of the classifier's signal or background distribution More... | |
| virtual void | MakeClass (const TString &classFileName=TString("")) const |
| create reader class for method (classification only at present) More... | |
| void | PrintHelpMessage () const |
| prints out method-specific help method More... | |
| void | WriteStateToFile () const |
| write options and weights to file note that each one text file for the main configuration information and one ROOT file for ROOT objects are created More... | |
| void | ReadStateFromFile () |
| Function to write options and weights to file. More... | |
| void | ReadStateFromStream (std::istream &tf) |
| read the header from the weight files of the different MVA methods More... | |
| void | ReadStateFromStream (TFile &rf) |
| write reference MVA distributions (and other information) to a ROOT type weight file More... | |
| void | ReadStateFromXMLString (const char *xmlstr) |
| for reading from memory More... | |
| virtual void | WriteEvaluationHistosToFile (Types::ETreeType treetype) |
| writes all MVA evaluation histograms to file More... | |
| virtual Double_t | GetEfficiency (const TString &, Types::ETreeType, Double_t &err) |
| fill background efficiency (resp. More... | |
| virtual Double_t | GetTrainingEfficiency (const TString &) |
| virtual std::vector< Float_t > | GetMulticlassEfficiency (std::vector< std::vector< Float_t > > &purity) |
| virtual std::vector< Float_t > | GetMulticlassTrainingEfficiency (std::vector< std::vector< Float_t > > &purity) |
| virtual Double_t | GetSignificance () const |
| compute significance of mean difference significance = |<S> - |/Sqrt(RMS_S2 + RMS_B2) More... | |
| virtual Double_t | GetROCIntegral (TH1D *histS, TH1D *histB) const |
| calculate the area (integral) under the ROC curve as a overall quality measure of the classification More... | |
| virtual Double_t | GetROCIntegral (PDF *pdfS=0, PDF *pdfB=0) const |
| calculate the area (integral) under the ROC curve as a overall quality measure of the classification More... | |
| virtual Double_t | GetMaximumSignificance (Double_t SignalEvents, Double_t BackgroundEvents, Double_t &optimal_significance_value) const |
| plot significance, S/Sqrt(S^2 + B^2), curve for given number of signal and background events; returns cut for maximum significance also returned via reference is the maximum significance More... | |
| virtual Double_t | GetSeparation (TH1 *, TH1 *) const |
| compute "separation" defined as <s2> = (1/2) Int_-oo..+oo { (S(x) - B(x))^2/(S(x) + B(x)) dx } More... | |
| virtual Double_t | GetSeparation (PDF *pdfS=0, PDF *pdfB=0) const |
| compute "separation" defined as <s2> = (1/2) Int_-oo..+oo { (S(x) - B(x))^2/(S(x) + B(x)) dx } More... | |
| virtual void | GetRegressionDeviation (UInt_t tgtNum, Types::ETreeType type, Double_t &stddev, Double_t &stddev90Percent) const |
| const TString & | GetJobName () const |
| const TString & | GetMethodName () const |
| TString | GetMethodTypeName () const |
| Types::EMVA | GetMethodType () const |
| const char * | GetName () const |
| Returns name of object. More... | |
| const TString & | GetTestvarName () const |
| const TString | GetProbaName () const |
| TString | GetWeightFileName () const |
| retrieve weight file name More... | |
| void | SetTestvarName (const TString &v="") |
| UInt_t | GetNvar () const |
| UInt_t | GetNVariables () const |
| UInt_t | GetNTargets () const |
| const TString & | GetInputVar (Int_t i) const |
| const TString & | GetInputLabel (Int_t i) const |
| const TString & | GetInputTitle (Int_t i) const |
| Double_t | GetMean (Int_t ivar) const |
| Double_t | GetRMS (Int_t ivar) const |
| Double_t | GetXmin (Int_t ivar) const |
| Double_t | GetXmax (Int_t ivar) const |
| Double_t | GetSignalReferenceCut () const |
| Double_t | GetSignalReferenceCutOrientation () const |
| void | SetSignalReferenceCut (Double_t cut) |
| void | SetSignalReferenceCutOrientation (Double_t cutOrientation) |
| TDirectory * | BaseDir () const |
| returns the ROOT directory where info/histograms etc of the corresponding MVA method instance are stored More... | |
| TDirectory * | MethodBaseDir () const |
| returns the ROOT directory where all instances of the corresponding MVA method are stored More... | |
| void | SetMethodDir (TDirectory *methodDir) |
| void | SetBaseDir (TDirectory *methodDir) |
| void | SetMethodBaseDir (TDirectory *methodDir) |
| UInt_t | GetTrainingTMVAVersionCode () const |
| UInt_t | GetTrainingROOTVersionCode () const |
| TString | GetTrainingTMVAVersionString () const |
| calculates the TMVA version string from the training version code on the fly More... | |
| TString | GetTrainingROOTVersionString () const |
| calculates the ROOT version string from the training version code on the fly More... | |
| TransformationHandler & | GetTransformationHandler (Bool_t takeReroutedIfAvailable=true) |
| const TransformationHandler & | GetTransformationHandler (Bool_t takeReroutedIfAvailable=true) const |
| void | RerouteTransformationHandler (TransformationHandler *fTargetTransformation) |
| DataSet * | Data () const |
| DataSetInfo & | DataInfo () const |
| UInt_t | GetNEvents () const |
| temporary event when testing on a different DataSet than the own one More... | |
| const Event * | GetEvent () const |
| const Event * | GetEvent (const TMVA::Event *ev) const |
| const Event * | GetEvent (Long64_t ievt) const |
| const Event * | GetEvent (Long64_t ievt, Types::ETreeType type) const |
| const Event * | GetTrainingEvent (Long64_t ievt) const |
| const Event * | GetTestingEvent (Long64_t ievt) const |
| const std::vector< TMVA::Event * > & | GetEventCollection (Types::ETreeType type) |
| returns the event collection (i.e. More... | |
| virtual Bool_t | IsSignalLike () |
| uses a pre-set cut on the MVA output (SetSignalReferenceCut and SetSignalReferenceCutOrientation) for a quick determination if an event would be selected as signal or background More... | |
| virtual Bool_t | IsSignalLike (Double_t mvaVal) |
| uses a pre-set cut on the MVA output (SetSignalReferenceCut and SetSignalReferenceCutOrientation) for a quick determination if an event with this mva output value would tbe selected as signal or background More... | |
| Bool_t | HasMVAPdfs () const |
| virtual void | SetAnalysisType (Types::EAnalysisType type) |
| Types::EAnalysisType | GetAnalysisType () const |
| Bool_t | DoRegression () const |
| Bool_t | DoMulticlass () const |
| void | DisableWriting (Bool_t setter) |
Public Member Functions inherited from TMVA::IMethod | |
| IMethod () | |
| virtual | ~IMethod () |
Public Member Functions inherited from TMVA::Configurable | |
| Configurable (const TString &theOption="") | |
| constructor More... | |
| virtual | ~Configurable () |
| default destructur More... | |
| virtual void | ParseOptions () |
| options parser More... | |
| void | PrintOptions () const |
| prints out the options set in the options string and the defaults More... | |
| const char * | GetConfigName () const |
| const char * | GetConfigDescription () const |
| void | SetConfigName (const char *n) |
| void | SetConfigDescription (const char *d) |
| template<class T > | |
| OptionBase * | DeclareOptionRef (T &ref, const TString &name, const TString &desc="") |
| template<class T > | |
| OptionBase * | DeclareOptionRef (T *&ref, Int_t size, const TString &name, const TString &desc="") |
| template<class T > | |
| void | AddPreDefVal (const T &) |
| template<class T > | |
| void | AddPreDefVal (const TString &optname, const T &) |
| void | CheckForUnusedOptions () const |
| checks for unused options in option string More... | |
| const TString & | GetOptions () const |
| void | SetOptions (const TString &s) |
| void | WriteOptionsToStream (std::ostream &o, const TString &prefix) const |
| write options to output stream (e.g. in writing the MVA weight files More... | |
| void | ReadOptionsFromStream (std::istream &istr) |
| read option back from the weight file More... | |
| void | AddOptionsXMLTo (void *parent) const |
| write options to XML file More... | |
| void | ReadOptionsFromXML (void *node) |
| void | SetMsgType (EMsgType t) |
| template<class T > | |
| TMVA::OptionBase * | DeclareOptionRef (T &ref, const TString &name, const TString &desc) |
| template<class T > | |
| TMVA::OptionBase * | DeclareOptionRef (T *&ref, Int_t size, const TString &name, const TString &desc) |
Public Member Functions inherited from TObject | |
| TObject () | |
| TObject constructor. More... | |
| TObject (const TObject &object) | |
| TObject copy ctor. More... | |
| TObject & | operator= (const TObject &rhs) |
| TObject assignment operator. More... | |
| virtual | ~TObject () |
| TObject destructor. More... | |
| virtual void | AppendPad (Option_t *option="") |
| Append graphics object to current pad. More... | |
| virtual void | Browse (TBrowser *b) |
| Browse object. May be overridden for another default action. More... | |
| virtual const char * | ClassName () const |
| Returns name of class to which the object belongs. More... | |
| virtual void | Clear (Option_t *="") |
| virtual TObject * | Clone (const char *newname="") const |
| Make a clone of an object using the Streamer facility. More... | |
| virtual Int_t | Compare (const TObject *obj) const |
| Compare abstract method. More... | |
| virtual void | Copy (TObject &object) const |
| Copy this to obj. More... | |
| virtual void | Delete (Option_t *option="") |
| Delete this object. More... | |
| virtual Int_t | DistancetoPrimitive (Int_t px, Int_t py) |
| Computes distance from point (px,py) to the object. More... | |
| virtual void | Draw (Option_t *option="") |
| Default Draw method for all objects. More... | |
| virtual void | DrawClass () const |
| Draw class inheritance tree of the class to which this object belongs. More... | |
| virtual TObject * | DrawClone (Option_t *option="") const |
| Draw a clone of this object in the current pad. More... | |
| virtual void | Dump () const |
| Dump contents of object on stdout. More... | |
| virtual void | Execute (const char *method, const char *params, Int_t *error=0) |
| Execute method on this object with the given parameter string, e.g. More... | |
| virtual void | Execute (TMethod *method, TObjArray *params, Int_t *error=0) |
| Execute method on this object with parameters stored in the TObjArray. More... | |
| virtual void | ExecuteEvent (Int_t event, Int_t px, Int_t py) |
| Execute action corresponding to an event at (px,py). More... | |
| virtual TObject * | FindObject (const char *name) const |
| Must be redefined in derived classes. More... | |
| virtual TObject * | FindObject (const TObject *obj) const |
| Must be redefined in derived classes. More... | |
| virtual Option_t * | GetDrawOption () const |
| Get option used by the graphics system to draw this object. More... | |
| virtual UInt_t | GetUniqueID () const |
| Return the unique object id. More... | |
| virtual const char * | GetIconName () const |
| Returns mime type name of object. More... | |
| virtual Option_t * | GetOption () const |
| virtual char * | GetObjectInfo (Int_t px, Int_t py) const |
| Returns string containing info about the object at position (px,py). More... | |
| virtual const char * | GetTitle () const |
| Returns title of object. More... | |
| virtual Bool_t | HandleTimer (TTimer *timer) |
| Execute action in response of a timer timing out. More... | |
| virtual ULong_t | Hash () const |
| Return hash value for this object. More... | |
| virtual Bool_t | InheritsFrom (const char *classname) const |
| Returns kTRUE if object inherits from class "classname". More... | |
| virtual Bool_t | InheritsFrom (const TClass *cl) const |
| Returns kTRUE if object inherits from TClass cl. More... | |
| virtual void | Inspect () const |
| Dump contents of this object in a graphics canvas. More... | |
| virtual Bool_t | IsFolder () const |
| Returns kTRUE in case object contains browsable objects (like containers or lists of other objects). More... | |
| virtual Bool_t | IsEqual (const TObject *obj) const |
| Default equal comparison (objects are equal if they have the same address in memory). More... | |
| virtual Bool_t | IsSortable () const |
| Bool_t | IsOnHeap () const |
| Bool_t | IsZombie () const |
| virtual Bool_t | Notify () |
| This method must be overridden to handle object notification. More... | |
| virtual void | ls (Option_t *option="") const |
| The ls function lists the contents of a class on stdout. More... | |
| virtual void | Paint (Option_t *option="") |
| This method must be overridden if a class wants to paint itself. More... | |
| virtual void | Pop () |
| Pop on object drawn in a pad to the top of the display list. More... | |
| virtual void | Print (Option_t *option="") const |
| This method must be overridden when a class wants to print itself. More... | |
| virtual Int_t | Read (const char *name) |
| Read contents of object with specified name from the current directory. More... | |
| virtual void | RecursiveRemove (TObject *obj) |
| Recursively remove this object from a list. More... | |
| virtual void | SaveAs (const char *filename="", Option_t *option="") const |
| Save this object in the file specified by filename. More... | |
| virtual void | SavePrimitive (std::ostream &out, Option_t *option="") |
| Save a primitive as a C++ statement(s) on output stream "out". More... | |
| virtual void | SetDrawOption (Option_t *option="") |
| Set drawing option for object. More... | |
| virtual void | SetUniqueID (UInt_t uid) |
| Set the unique object id. More... | |
| virtual void | UseCurrentStyle () |
| Set current style settings in this object This function is called when either TCanvas::UseCurrentStyle or TROOT::ForceStyle have been invoked. More... | |
| virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) |
| Write this object to the current directory. More... | |
| virtual Int_t | Write (const char *name=0, Int_t option=0, Int_t bufsize=0) const |
| Write this object to the current directory. More... | |
| void * | operator new (size_t sz) |
| void * | operator new[] (size_t sz) |
| void * | operator new (size_t sz, void *vp) |
| void * | operator new[] (size_t sz, void *vp) |
| void | operator delete (void *ptr) |
| Operator delete. More... | |
| void | operator delete[] (void *ptr) |
| Operator delete []. More... | |
| void | SetBit (UInt_t f, Bool_t set) |
| Set or unset the user status bits as specified in f. More... | |
| void | SetBit (UInt_t f) |
| void | ResetBit (UInt_t f) |
| Bool_t | TestBit (UInt_t f) const |
| Int_t | TestBits (UInt_t f) const |
| void | InvertBit (UInt_t f) |
| virtual void | Info (const char *method, const char *msgfmt,...) const |
| Issue info message. More... | |
| virtual void | Warning (const char *method, const char *msgfmt,...) const |
| Issue warning message. More... | |
| virtual void | Error (const char *method, const char *msgfmt,...) const |
| Issue error message. More... | |
| virtual void | SysError (const char *method, const char *msgfmt,...) const |
| Issue system error message. More... | |
| virtual void | Fatal (const char *method, const char *msgfmt,...) const |
| Issue fatal error message. More... | |
| void | AbstractMethod (const char *method) const |
| Use this method to implement an "abstract" method that you don't want to leave purely abstract. More... | |
| void | MayNotUse (const char *method) const |
| Use this method to signal that a method (defined in a base class) may not be called in a derived class (in principle against good design since a child class should not provide less functionality than its parent, however, sometimes it is necessary). More... | |
| void | Obsolete (const char *method, const char *asOfVers, const char *removedFromVers) const |
| Use this method to declare a method obsolete. More... | |
Protected Member Functions | |
| void | MakeClassSpecific (std::ostream &, const TString &) const |
| write specific classifier response More... | |
| void | MakeClassRuleCuts (std::ostream &) const |
| print out the rule cuts More... | |
| void | MakeClassLinear (std::ostream &) const |
| print out the linear terms More... | |
| void | GetHelpMessage () const |
| get help message text More... | |
| void | Init (void) |
| default initialization More... | |
| void | InitEventSample (void) |
| write all Events from the Tree into a vector of Events, that are more easily manipulated. More... | |
| void | InitMonitorNtuple () |
| initialize the monitoring ntuple More... | |
| void | TrainTMVARuleFit () |
| training of rules using TMVA implementation More... | |
| void | TrainJFRuleFit () |
| training of rules using Jerome Friedmans implementation More... | |
Protected Member Functions inherited from TMVA::MethodBase | |
| void | NoErrorCalc (Double_t *const err, Double_t *const errUpper) |
| virtual void | ReadWeightsFromStream (TFile &) |
| void | SetWeightFileName (TString) |
| set the weight file name (depreciated) More... | |
| const TString & | GetWeightFileDir () const |
| void | SetWeightFileDir (TString fileDir) |
| set directory of weight file More... | |
| Bool_t | IsNormalised () const |
| void | SetNormalised (Bool_t norm) |
| Bool_t | Verbose () const |
| Bool_t | Help () const |
| const TString & | GetInternalVarName (Int_t ivar) const |
| const TString & | GetOriginalVarName (Int_t ivar) const |
| Bool_t | HasTrainingTree () const |
| virtual void | MakeClassSpecificHeader (std::ostream &, const TString &="") const |
| void | Statistics (Types::ETreeType treeType, const TString &theVarName, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &) |
| calculates rms,mean, xmin, xmax of the event variable this can be either done for the variables as they are or for normalised variables (in the range of 0-1) if "norm" is set to kTRUE More... | |
| Bool_t | TxtWeightsOnly () const |
| Bool_t | IsConstructedFromWeightFile () const |
| Bool_t | IgnoreEventsWithNegWeightsInTraining () const |
Protected Member Functions inherited from TMVA::Configurable | |
| Bool_t | LooseOptionCheckingEnabled () const |
| void | EnableLooseOptions (Bool_t b=kTRUE) |
| void | WriteOptionsReferenceToFile () |
| write complete options to output stream More... | |
| void | ResetSetFlag () |
| resets the IsSet falg for all declare options to be called before options are read from stream More... | |
| const TString & | GetReferenceFile () const |
| MsgLogger & | Log () const |
Protected Member Functions inherited from TObject | |
| void | MakeZombie () |
| virtual void | DoError (int level, const char *location, const char *fmt, va_list va) const |
| Interface to ErrorHandler (protected). More... | |
Private Member Functions | |
| template<typename T > | |
| Bool_t | VerifyRange (MsgLogger &mlog, const char *varstr, T &var, const T &vmin, const T &vmax) |
| template<typename T > | |
| Bool_t | VerifyRange (MsgLogger &mlog, const char *varstr, T &var, const T &vmin, const T &vmax, const T &vdef) |
| template<typename T > | |
| Int_t | VerifyRange (const T &var, const T &vmin, const T &vmax) |
| void | DeclareOptions () |
| define the options (their key words) that can be set in the option string know options. More... | |
| void | ProcessOptions () |
| process the options specified by the user More... | |
Additional Inherited Members | |
Public Types inherited from TMVA::MethodBase | |
| enum | EWeightFileType { kROOT =0, kTEXT } |
Public Types inherited from TObject | |
| enum | EStatusBits { kCanDelete = BIT(0), kMustCleanup = BIT(3), kObjInCanvas = BIT(3), kIsReferenced = BIT(4), kHasUUID = BIT(5), kCannotPick = BIT(6), kNoContextMenu = BIT(8), kInvalidObject = BIT(13) } |
| enum | { kIsOnHeap = 0x01000000, kNotDeleted = 0x02000000, kZombie = 0x04000000, kBitMask = 0x00ffffff } |
| enum | { kSingleKey = BIT(0), kOverwrite = BIT(1), kWriteDelete = BIT(2) } |
Static Public Member Functions inherited from TObject | |
| static Long_t | GetDtorOnly () |
| Return destructor only flag. More... | |
| static void | SetDtorOnly (void *obj) |
| Set destructor only flag. More... | |
| static Bool_t | GetObjectStat () |
| Get status of object stat flag. More... | |
| static void | SetObjectStat (Bool_t stat) |
| Turn on/off tracking of objects in the TObjectTable. More... | |
Public Attributes inherited from TMVA::MethodBase | |
| const Event * | fTmpEvent |
| Bool_t | fSetupCompleted |
Static Protected Member Functions inherited from TMVA::MethodBase | |
| static MethodBase * | GetThisBase () |
| return a pointer the base class of this method More... | |
Protected Attributes inherited from TMVA::MethodBase | |
| Ranking * | fRanking |
| std::vector< TString > * | fInputVars |
| Int_t | fNbins |
| Int_t | fNbinsMVAoutput |
| Int_t | fNbinsH |
| Types::EAnalysisType | fAnalysisType |
| std::vector< Float_t > * | fRegressionReturnVal |
| std::vector< Float_t > * | fMulticlassReturnVal |
| UInt_t | fSignalClass |
| UInt_t | fBackgroundClass |
#include <TMVA/MethodRuleFit.h>
Inheritance diagram for TMVA::MethodRuleFit:
Collaboration diagram for TMVA::MethodRuleFit:| TMVA::MethodRuleFit::MethodRuleFit | ( | const TString & | jobName, |
| const TString & | methodTitle, | ||
| DataSetInfo & | theData, | ||
| const TString & | theOption = "", |
||
| TDirectory * | theTargetDir = 0 |
||
| ) |
standard constructor
Definition at line 63 of file MethodRuleFit.cxx.
| TMVA::MethodRuleFit::MethodRuleFit | ( | DataSetInfo & | theData, |
| const TString & | theWeightFile, | ||
| TDirectory * | theTargetDir = NULL |
||
| ) |
constructor from weight file
Definition at line 113 of file MethodRuleFit.cxx.
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destructor
Definition at line 161 of file MethodRuleFit.cxx.
add the rules to XML node
Implements TMVA::MethodBase.
Definition at line 582 of file MethodRuleFit.cxx.
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computes ranking of input variables
Implements TMVA::MethodBase.
Definition at line 567 of file MethodRuleFit.cxx.
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define the options (their key words) that can be set in the option string know options.
RuleFitModule <string> available values are: RFTMVA - use TMVA implementation
GDTau <float> gradient-directed path: fit threshhold, default GDTauPrec <float> gradient-directed path: precision of estimated tau GDStep <float> gradient-directed path: step size GDNSteps <float> gradient-directed path: number of steps
fEventsMin <float> minimum fraction of events in a splittable node fEventsMax <float> maximum fraction of events in a splittable node nTrees <float> number of trees in forest. ForestType <string> available values are: Random - create forest using random subsample and only random variables subset at each node AdaBoost - create forest with boosted events
RuleMinDist <float> min distance allowed between rules MinImp <float> minimum rule importance accepted Model <string> model to be used available values are: ModRuleLinear <default> ModRule ModLinear
RFWorkDir <string> directory where Friedmans module (rf_go.exe) is installed RFNrules <int> maximum number of rules allowed RFNendnodes <int> average number of end nodes in the forest of trees
Implements TMVA::MethodBase.
Definition at line 221 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes().
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Definition at line 103 of file MethodRuleFit.h.
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Definition at line 116 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup().
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Definition at line 114 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup().
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Definition at line 117 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitParams::Init().
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Definition at line 115 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup().
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Definition at line 118 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitParams::Init().
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get help message text
typical length of text line: "|--------------------------------------------------------------|"
Implements TMVA::IMethod.
Definition at line 740 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes().
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Definition at line 120 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup().
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Definition at line 111 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::MakeForest().
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Definition at line 101 of file MethodRuleFit.h.
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Definition at line 110 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::MakeForest().
returns MVA value for given event
Implements TMVA::MethodBase.
Definition at line 606 of file MethodRuleFit.cxx.
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Definition at line 112 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::MakeForest().
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Definition at line 104 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::MakeForest().
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Definition at line 108 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::BuildTree().
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Definition at line 109 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::BuildTree().
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Definition at line 124 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup().
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Definition at line 123 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup().
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Definition at line 122 of file MethodRuleFit.h.
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Definition at line 100 of file MethodRuleFit.h.
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Definition at line 99 of file MethodRuleFit.h.
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Definition at line 107 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::MakeForest().
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Definition at line 106 of file MethodRuleFit.h.
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Definition at line 102 of file MethodRuleFit.h.
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Definition at line 105 of file MethodRuleFit.h.
Referenced by TMVA::RuleFitAPI::ImportSetup(), and TMVA::RuleFit::SetTrainingEvents().
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RuleFit can handle classification with 2 classes.
Implements TMVA::IMethod.
Definition at line 170 of file MethodRuleFit.cxx.
default initialization
Implements TMVA::MethodBase.
Definition at line 389 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes().
write all Events from the Tree into a vector of Events, that are more easily manipulated.
This method should never be called without existing trainingTree, as it the vector of events from the ROOT training tree
Definition at line 414 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes(), ProcessOptions(), and Train().
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initialize the monitoring ntuple
Definition at line 368 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes(), and Train().
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print out the linear terms
Definition at line 704 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes(), and MakeClassSpecific().
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print out the rule cuts
Definition at line 646 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes(), and MakeClassSpecific().
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write specific classifier response
Reimplemented from TMVA::MethodBase.
Definition at line 627 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes().
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process the options specified by the user
Implements TMVA::MethodBase.
Definition at line 259 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes().
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read rules from an std::istream
Implements TMVA::MethodBase.
Definition at line 590 of file MethodRuleFit.cxx.
read rules from XML node
Implements TMVA::MethodBase.
Definition at line 598 of file MethodRuleFit.cxx.
Implements TMVA::MethodBase.
Definition at line 436 of file MethodRuleFit.cxx.
training of rules using Jerome Friedmans implementation
Definition at line 524 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes(), and Train().
training of rules using TMVA implementation
Definition at line 459 of file MethodRuleFit.cxx.
Referenced by GetRFNendnodes(), and Train().
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Definition at line 96 of file MethodRuleFit.h.
Referenced by TMVA::RuleFit::MakeForest(), and TMVA::RuleEnsemble::PrintRuleGen().
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Definition at line 239 of file MethodRuleFit.h.
Referenced by GetRFNendnodes(), ProcessOptions(), and VerifyRange().
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Definition at line 261 of file MethodRuleFit.h.
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Definition at line 229 of file MethodRuleFit.h.
write special monitoring histograms to file (here ntuple)
Reimplemented from TMVA::MethodBase.
Definition at line 617 of file MethodRuleFit.cxx.
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Definition at line 167 of file MethodRuleFit.h.
Referenced by GetTrainingEvents(), InitEventSample(), and ~MethodRuleFit().
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Definition at line 191 of file MethodRuleFit.h.
Referenced by GetForest(), and ~MethodRuleFit().
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Definition at line 202 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 214 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetGDErrScale(), and ProcessOptions().
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Definition at line 213 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetGDNPathSteps(), and ProcessOptions().
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Definition at line 205 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetGDPathEveFrac(), and ProcessOptions().
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Definition at line 212 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetGDPathStep(), and ProcessOptions().
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Definition at line 207 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 210 of file MethodRuleFit.h.
Referenced by Init(), and ProcessOptions().
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Definition at line 209 of file MethodRuleFit.h.
Referenced by Init(), and ProcessOptions().
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Definition at line 208 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 211 of file MethodRuleFit.h.
Referenced by Init(), and ProcessOptions().
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Definition at line 206 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetGDValidEveFrac(), and ProcessOptions().
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Definition at line 219 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetLinQuantile(), Init(), and ProcessOptions().
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Definition at line 196 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetMaxFracNEve(), and ProcessOptions().
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Definition at line 195 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetMinFracNEve(), and ProcessOptions().
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Definition at line 215 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 217 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 171 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), TrainTMVARuleFit(), and WriteMonitoringHistosToFile().
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Definition at line 197 of file MethodRuleFit.h.
Referenced by GetNCuts(), and Init().
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Definition at line 173 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 172 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 175 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 176 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 181 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 180 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 179 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 178 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 177 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 192 of file MethodRuleFit.h.
Referenced by DeclareOptions(), GetNTrees(), and ProcessOptions().
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Definition at line 182 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 174 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 183 of file MethodRuleFit.h.
Referenced by InitMonitorNtuple(), and TrainTMVARuleFit().
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Definition at line 200 of file MethodRuleFit.h.
Referenced by GetPruneMethod(), and ProcessOptions().
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Definition at line 199 of file MethodRuleFit.h.
Referenced by Init(), and ProcessOptions().
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Definition at line 201 of file MethodRuleFit.h.
Referenced by GetPruneStrength(), and Init().
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Definition at line 190 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and GetRFNendnodes().
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Definition at line 189 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and GetRFNrules().
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Definition at line 188 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and GetRFWorkDir().
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Definition at line 166 of file MethodRuleFit.h.
Referenced by AddWeightsXMLTo(), CreateRanking(), GetMvaValue(), GetRuleFitConstPtr(), GetRuleFitPtr(), MakeClassLinear(), MakeClassRuleCuts(), MakeClassSpecific(), ProcessOptions(), ReadWeightsFromStream(), ReadWeightsFromXML(), Train(), TrainJFRuleFit(), and TrainTMVARuleFit().
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Definition at line 186 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 218 of file MethodRuleFit.h.
Referenced by DeclareOptions(), and ProcessOptions().
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Definition at line 194 of file MethodRuleFit.h.
Referenced by GetSeparationBase(), GetSeparationBaseConst(), and ProcessOptions().
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Definition at line 198 of file MethodRuleFit.h.
Referenced by Init(), and ProcessOptions().
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Definition at line 168 of file MethodRuleFit.h.
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Definition at line 193 of file MethodRuleFit.h.
Referenced by GetTreeEveFrac(), Init(), InitEventSample(), and ProcessOptions().
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Definition at line 203 of file MethodRuleFit.h.
Referenced by ProcessOptions(), and UseBoost().
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Definition at line 187 of file MethodRuleFit.h.
Referenced by ProcessOptions(), and Train().