| Package | Description |
|---|---|
| neurord |
Stochastic diffusion segments of dendrits with spines.
|
| neurord.model |
These classes represent the model as it is stored in the input files.
|
| neurord.numeric | |
| neurord.numeric.chem |
Species and reactions
|
| neurord.numeric.grid |
SteppedStochasticCalc contains the particle number based calculation with fixed timesteps
where a number of diffusion events and reactions is generated for each reaction, volume and
volume-volume connection at each timestep.
|
| neurord.numeric.pool |
These are deterministic calculations for a single mixed pool.
|
| neurord.numeric.stochastic |
These are the functions for the innner loops of the calculation.
|
| Class and Description |
|---|
| BaseCalc
Units: concentrations are expressed in nM and volumes in cubic microns
So, in these units, one Litre is 10^15 and a 1M solution is 10^9.
|
| Class and Description |
|---|
| BaseCalc.algorithm_t |
| BaseCalc.distribution_t |
| Class and Description |
|---|
| BaseCalc
Units: concentrations are expressed in nM and volumes in cubic microns
So, in these units, one Litre is 10^15 and a 1M solution is 10^9.
|
| BaseCalc.algorithm_t |
| BaseCalc.distribution_t |
| BaseCalc.output_t |
| Class and Description |
|---|
| BaseCalc.distribution_t |
| Class and Description |
|---|
| BaseCalc
Units: concentrations are expressed in nM and volumes in cubic microns
So, in these units, one Litre is 10^15 and a 1M solution is 10^9.
|
| Class and Description |
|---|
| BaseCalc
Units: concentrations are expressed in nM and volumes in cubic microns
So, in these units, one Litre is 10^15 and a 1M solution is 10^9.
|
| Class and Description |
|---|
| BaseCalc.distribution_t |
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