org.openscience.jmol.app.nbo

Class NBODialog

java.lang.Object

java.awt.Component

java.awt.Container

java.awt.Window

java.awt.Dialog

javax.swing.JDialog

org.openscience.jmol.app.nbo.NBODialogConfig

org.openscience.jmol.app.nbo.NBODialogModel

org.openscience.jmol.app.nbo.NBODialogRun

org.openscience.jmol.app.nbo.NBODialogView

org.openscience.jmol.app.nbo.NBODialogSearch

org.openscience.jmol.app.nbo.NBODialog

All Implemented Interfaces:

java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable, javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants

public class NBODialog
extends NBODialogSearch

A dialog for interacting with NBOServer The NBODialog class includes all public entry points. In addition, there are several superclasses: JDialog NBODialogConfig -- NBODialogModel ---- NBODialogRun ------ NBODialogView -------- NBODialogSearch ---------- NBODialog All of these are one object, just separated this way to allow some compartmentalization of tasks along the lines of NBOPro6.

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class org.openscience.jmol.app.nbo.NBODialogConfig

NBODialogConfig.StyledComboBoxUI

Nested classes/interfaces inherited from class javax.swing.JDialog

javax.swing.JDialog.AccessibleJDialog

Nested classes/interfaces inherited from class java.awt.Dialog

java.awt.Dialog.AccessibleAWTDialog, java.awt.Dialog.ModalExclusionType, java.awt.Dialog.ModalityType

Nested classes/interfaces inherited from class java.awt.Window

java.awt.Window.AccessibleAWTWindow, java.awt.Window.Type

Nested classes/interfaces inherited from class java.awt.Container

java.awt.Container.AccessibleAWTContainer

Nested classes/interfaces inherited from class java.awt.Component

java.awt.Component.AccessibleAWTComponent, java.awt.Component.BaselineResizeBehavior, java.awt.Component.BltBufferStrategy, java.awt.Component.FlipBufferStrategy

Field Summary

Fields

Modifier and Type	Field and Description
protected boolean	isSet
private javax.swing.JTextField	jtRawInput

Fields inherited from class org.openscience.jmol.app.nbo.NBODialogSearch

at1, at2, bas2, bend, col, comboBox, dip, e2, home, keyProp, keyW, listM, mo, nbo, nbo1, nbo2, nlmo, npa, nrt, op, opBas, operator, orb, orbStart, row, splitPane, steric, unit, viewAll

Fields inherited from class org.openscience.jmol.app.nbo.NBODialogView

basis, basSet, btnProf, btnShow, btnView3D, camFieldIDs, camFields, contourFieldIDs, contourFields, dispBox, dList, goBtn2, iLast, iLastD, inLobes, keywordNumber, list, lists, model, numStor, oneD, orbBox, pLab, planeFieldIDs, planeFields, positiveSign, profBox, selectPanel, vectorFieldIDs, vectorFields, VIEW_STATE_CAMERA, VIEW_STATE_MAIN, VIEW_STATE_PLANE, VIEW_STATE_VECTOR, viewState, vLab

Fields inherited from class org.openscience.jmol.app.nbo.NBODialogRun

choose3C, chooseBonds, delDeloc, deleteAtomBlocks, deleteBlocks, deleteElements, deleteGeminal, deleteLewisOrbs, deleteVicinal, delOrbs, delOrbsL, editOps, fileData, fileData2, keywordButtons, keywordList, lastEss, nboKeywords, plotFileName, valid3C, validBonds, validLP

Fields inherited from class org.openscience.jmol.app.nbo.NBODialogModel

atomNumBox, CONFIRM_SAVE, CONFIRM_VIEWOUTPUT, currVal, editAction, editBox, editMode, jbEdit, jtJmolInput, jtLineInput, jtSelectAtoms, savePath, selected, tfExtS, tfFolderS, tfNameS, titleColor, titleFont, usePath, valLab, VALUE

Fields inherited from class org.openscience.jmol.app.nbo.NBODialogConfig

alterHelp, bodyText, browse, chbHelp, clipHelp, DEFAULT_PARAMS, DIALOG_CONFIG, DIALOG_LIST, DIALOG_MODEL, DIALOG_RUN, DIALOG_SEARCH, DIALOG_VIEW, dialogMode, fuseHelp, haveService, helpBtn, helpConfig, helpModel, icon, inputFile, isJmolNBO, jCheckAtomNum, jCheckNboView, jmolAtomCount, jobStem, jpNboOutput, linkHelp, lonePairs, mainButtons, modelButton, mutateHelp, nboFont, nboService, nboView, rebondHelp, reqInfo, runButton, saveHelp, searchButton, searchHelp, sep, serverPathLabel, showHelp, showRunDone, showWorkPathDone, statusLab, statusPanel, switchHelp, symHelp, tfExt, tfFolder, tfName, topPanel, twistHelp, unifyHelp, useHelp, viewButton, vwr, workingPath

Fields inherited from class javax.swing.JDialog

accessibleContext, rootPane, rootPaneCheckingEnabled

Fields inherited from class java.awt.Dialog

DEFAULT_MODALITY_TYPE

Fields inherited from class java.awt.Component

BOTTOM_ALIGNMENT, CENTER_ALIGNMENT, LEFT_ALIGNMENT, RIGHT_ALIGNMENT, TOP_ALIGNMENT

Fields inherited from interface javax.swing.WindowConstants

DISPOSE_ON_CLOSE, DO_NOTHING_ON_CLOSE, EXIT_ON_CLOSE, HIDE_ON_CLOSE

Fields inherited from interface java.awt.image.ImageObserver

ABORT, ALLBITS, ERROR, FRAMEBITS, HEIGHT, PROPERTIES, SOMEBITS, WIDTH

Constructor Summary

Constructors

Constructor and Description
NBODialog(javax.swing.JFrame f, Viewer vwr, NBOService nboService) Creates a dialog for getting info related to output frames in nbo format.

Method Summary

Modifier and Type	Method and Description
void	addLine(int type, java.lang.String line)
(package private) void	alert(java.lang.String msg)
protected javax.swing.JPanel	buildStatusPanel()
private boolean	checkEnabled()
protected void	close()
protected boolean	connect()
private void	createDialog(int width, int height)
private javax.swing.JButton	getMainButton(java.lang.String path, char mode)
void	notifyCallback(CBK type, java.lang.Object[] data) Callback from Jmol Viewer indicating user actions
void	openPanel(char type)
protected void	rawInput()
void	setStatus(java.lang.String statusInfo)
private void	setThis(javax.swing.JButton btn)
protected void	showErrorFile(java.lang.String err)
protected void	showHelp(java.lang.String key)
protected void	showWorkpathDialog(java.lang.String workingPath)

Methods inherited from class org.openscience.jmol.app.nbo.NBODialogSearch

basChange, buildSearch, changeKey, getList1, goSearchClicked, labelAt, listClicked, notifyCallbackS, opBas, rawInputS, setLists, showMessage

Methods inherited from class org.openscience.jmol.app.nbo.NBODialogView

basisSel, buildView, cam1, cam2, cam3, cam4, cam5, cam6, dispBox, goViewClicked, nboResetV, notifyCallbackV, plane, processOrbitalList, rawInputV, select, showOrbJmol, showOrbJmol, showView1D2D, stip, vector, view3D

Methods inherited from class org.openscience.jmol.app.nbo.NBODialogRun

addBond, addChooseKeylist, addDelFieldEl, addManualEditor, addNBOKeylist, buildRun, deleteBlocks, editOpChanged, essChanged, getChooseList, getCurrentChooseList, getDelList, getFileContents, goRunClicked, readInputFile, removeListParams, resetBadChooseList, resetRunFile, runS, setBonds, showConfDialog, showInputDialog

Methods inherited from class org.openscience.jmol.app.nbo.NBODialogModel

actionSelected, buildModel, clearModel, clearSelected, clip, editModel, getModel, getSymmetry, getValue, helpDialogM, loadModel, modelCmd, modelOut, notifyCallbackM, notifyLoadModel, rawInputM, saveHistoryM, saveModel, showConfirmationDialog, showSaveDialog, showWorkpathDialogM

Methods inherited from class org.openscience.jmol.app.nbo.NBODialogConfig

appendOutput, appendOutputWithCaret, appendToFile, buildConfig, buildTopPanel, centerDialog, checkJmolNBO, clearInputFile, clearOutput, enableComponentsR, folderBox, getExt, getHelp, getJobStem, nboReset, newNBOFile, placeNBODialog, rawCmd, resetColorScheme, saveHistory, saveWorkHistory, setComponents, setInputFile, setNBOColorScheme, setVisible, showAtomNums, showNboOutput, showNBOPathDialog, showSelected

Methods inherited from class javax.swing.JDialog

addImpl, createRootPane, dialogInit, getAccessibleContext, getContentPane, getDefaultCloseOperation, getGlassPane, getGraphics, getJMenuBar, getLayeredPane, getRootPane, getTransferHandler, isDefaultLookAndFeelDecorated, isRootPaneCheckingEnabled, paramString, processWindowEvent, remove, repaint, setContentPane, setDefaultCloseOperation, setDefaultLookAndFeelDecorated, setGlassPane, setJMenuBar, setLayeredPane, setLayout, setRootPane, setRootPaneCheckingEnabled, setTransferHandler, update

Methods inherited from class java.awt.Dialog

addNotify, getModalityType, getTitle, hide, isModal, isResizable, isUndecorated, setBackground, setModal, setModalityType, setOpacity, setResizable, setShape, setTitle, setUndecorated, show, toBack

Methods inherited from class java.awt.Window

addPropertyChangeListener, addPropertyChangeListener, addWindowFocusListener, addWindowListener, addWindowStateListener, applyResourceBundle, applyResourceBundle, createBufferStrategy, createBufferStrategy, dispose, getBackground, getBufferStrategy, getFocusableWindowState, getFocusCycleRootAncestor, getFocusOwner, getFocusTraversalKeys, getIconImages, getInputContext, getListeners, getLocale, getModalExclusionType, getMostRecentFocusOwner, getOpacity, getOwnedWindows, getOwner, getOwnerlessWindows, getShape, getToolkit, getType, getWarningString, getWindowFocusListeners, getWindowListeners, getWindows, getWindowStateListeners, isActive, isAlwaysOnTop, isAlwaysOnTopSupported, isAutoRequestFocus, isFocusableWindow, isFocusCycleRoot, isFocused, isLocationByPlatform, isOpaque, isShowing, isValidateRoot, pack, paint, postEvent, processEvent, processWindowFocusEvent, processWindowStateEvent, removeNotify, removeWindowFocusListener, removeWindowListener, removeWindowStateListener, reshape, setAlwaysOnTop, setAutoRequestFocus, setBounds, setBounds, setCursor, setFocusableWindowState, setFocusCycleRoot, setIconImage, setIconImages, setLocation, setLocation, setLocationByPlatform, setLocationRelativeTo, setMinimumSize, setModalExclusionType, setSize, setSize, setType, toFront

Methods inherited from class java.awt.Container

add, add, add, add, add, addContainerListener, applyComponentOrientation, areFocusTraversalKeysSet, countComponents, deliverEvent, doLayout, findComponentAt, findComponentAt, getAlignmentX, getAlignmentY, getComponent, getComponentAt, getComponentAt, getComponentCount, getComponents, getComponentZOrder, getContainerListeners, getFocusTraversalPolicy, getInsets, getLayout, getMaximumSize, getMinimumSize, getMousePosition, getPreferredSize, insets, invalidate, isAncestorOf, isFocusCycleRoot, isFocusTraversalPolicyProvider, isFocusTraversalPolicySet, layout, list, list, locate, minimumSize, paintComponents, preferredSize, print, printComponents, processContainerEvent, remove, removeAll, removeContainerListener, setComponentZOrder, setFocusTraversalKeys, setFocusTraversalPolicy, setFocusTraversalPolicyProvider, setFont, transferFocusDownCycle, validate, validateTree

Methods inherited from class java.awt.Component

action, add, addComponentListener, addFocusListener, addHierarchyBoundsListener, addHierarchyListener, addInputMethodListener, addKeyListener, addMouseListener, addMouseMotionListener, addMouseWheelListener, bounds, checkImage, checkImage, coalesceEvents, contains, contains, createImage, createImage, createVolatileImage, createVolatileImage, disable, disableEvents, dispatchEvent, enable, enable, enableEvents, enableInputMethods, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, firePropertyChange, getBaseline, getBaselineResizeBehavior, getBounds, getBounds, getColorModel, getComponentListeners, getComponentOrientation, getCursor, getDropTarget, getFocusListeners, getFocusTraversalKeysEnabled, getFont, getFontMetrics, getForeground, getGraphicsConfiguration, getHeight, getHierarchyBoundsListeners, getHierarchyListeners, getIgnoreRepaint, getInputMethodListeners, getInputMethodRequests, getKeyListeners, getLocation, getLocation, getLocationOnScreen, getMouseListeners, getMouseMotionListeners, getMousePosition, getMouseWheelListeners, getName, getParent, getPeer, getPropertyChangeListeners, getPropertyChangeListeners, getSize, getSize, getTreeLock, getWidth, getX, getY, gotFocus, handleEvent, hasFocus, imageUpdate, inside, isBackgroundSet, isCursorSet, isDisplayable, isDoubleBuffered, isEnabled, isFocusable, isFocusOwner, isFocusTraversable, isFontSet, isForegroundSet, isLightweight, isMaximumSizeSet, isMinimumSizeSet, isPreferredSizeSet, isValid, isVisible, keyDown, keyUp, list, list, list, location, lostFocus, mouseDown, mouseDrag, mouseEnter, mouseExit, mouseMove, mouseUp, move, nextFocus, paintAll, prepareImage, prepareImage, printAll, processComponentEvent, processFocusEvent, processHierarchyBoundsEvent, processHierarchyEvent, processInputMethodEvent, processKeyEvent, processMouseEvent, processMouseMotionEvent, processMouseWheelEvent, remove, removeComponentListener, removeFocusListener, removeHierarchyBoundsListener, removeHierarchyListener, removeInputMethodListener, removeKeyListener, removeMouseListener, removeMouseMotionListener, removeMouseWheelListener, removePropertyChangeListener, removePropertyChangeListener, repaint, repaint, repaint, requestFocus, requestFocus, requestFocusInWindow, requestFocusInWindow, resize, resize, revalidate, setComponentOrientation, setDropTarget, setEnabled, setFocusable, setFocusTraversalKeysEnabled, setForeground, setIgnoreRepaint, setLocale, setMaximumSize, setName, setPreferredSize, show, size, toString, transferFocus, transferFocusBackward, transferFocusUpCycle

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

jtRawInput

private javax.swing.JTextField jtRawInput

isSet

protected boolean isSet

Constructor Detail

NBODialog

public NBODialog(javax.swing.JFrame f,
                 Viewer vwr,
                 NBOService nboService)

Creates a dialog for getting info related to output frames in nbo format.

Parameters:

f - The frame assosiated with the dialog

vwr - The interacting display we are reproducing (source of view angle info etc)

nboService -

Method Detail

createDialog

private void createDialog(int width,
                          int height)

getMainButton

private javax.swing.JButton getMainButton(java.lang.String path,
                                          char mode)

showWorkpathDialog

protected void showWorkpathDialog(java.lang.String workingPath)

Specified by:

showWorkpathDialog in class NBODialogConfig

showErrorFile

protected void showErrorFile(java.lang.String err)

buildStatusPanel

protected javax.swing.JPanel buildStatusPanel()

close

protected void close()

checkEnabled

private boolean checkEnabled()

connect

protected boolean connect()

Specified by:

connect in class NBODialogConfig

openPanel

public void openPanel(char type)

setThis

private void setThis(javax.swing.JButton btn)

rawInput

protected void rawInput()

notifyCallback

public void notifyCallback(CBK type,
                           java.lang.Object[] data)

Callback from Jmol Viewer indicating user actions

Parameters:

type -

data -

alert

void alert(java.lang.String msg)

showHelp

protected void showHelp(java.lang.String key)

addLine

public void addLine(int type,
                    java.lang.String line)

setStatus

public void setStatus(java.lang.String statusInfo)