org.jmol.modelsetbio
Class Helix

java.lang.Object
  org.jmol.modelsetbio.ProteinStructure
      org.jmol.modelsetbio.Helix

public class Helix
extends ProteinStructure

Field Summary

Fields inherited from class org.jmol.modelsetbio.ProteinStructure

apolymer, axisA, axisB, axisUnitVector, globalSerialID, monomerCount, monomerIndexFirst, monomerIndexLast, segments, type, uniqueID, vectorProjection

Constructor Summary

Helix(AlphaPolymer apolymer, int monomerIndex, int monomerCount)

Method Summary

void	calcAxis()

Methods inherited from class org.jmol.modelsetbio.ProteinStructure

addMonomer, calcSegments, getAxisEndPoint, getAxisStartPoint, getIndex, getInfo, getMonomerCount, getMonomerIndex, getSegments, getStructureMidPoint, lowerNeighborIsHelixOrSheet, removeMonomer, resetAxes, upperNeighborIsHelixOrSheet

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Helix

Helix(AlphaPolymer apolymer,
      int monomerIndex,
      int monomerCount)

Method Detail

calcAxis

public void calcAxis()

Overrides:

calcAxis in class ProteinStructure